STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRM2rRNA methyltransferase 2, mitochondrial. (237 aa)    
Predicted Functional Partners:
MTG1
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
 
 0.966
NSUN4
5-methylcytosine rRNA methyltransferase NSUN4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.887
MALSU1
Mitochondrial assembly of ribosomal large subunit protein 1.
    
 
 0.876
MTG2
Mitochondrial ribosome-associated GTPase 2.
   
 
 0.852
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 
 0.845
MRPL36
39S ribosomal protein L36, mitochondrial.
    
 
 0.841
SURF6
Surfeit locus protein 6.
   
 
 0.821
MRPL19
39S ribosomal protein L19, mitochondrial.
   
 
 0.806
NOP58
Nucleolar protein 58.
  
 0.805
MRPL11
39S ribosomal protein L11, mitochondrial.
    
 
 0.796
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.