Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC110470184Ankyrin repeat and fibronectin type-III domain-containing protein 1. (1246 aa)    
Predicted Functional Partners:
LOC110483826
Noggin.
      
 0.565
SYNGR2
Synaptogyrin.
      
 0.540
C17orf67
Uncharacterized protein C17orf67.
      
 0.486
SMG8
Protein SMG8.
      
 0.458
AATF
Protein AATF.
      
 0.456
MRM1
rRNA methyltransferase 1, mitochondrial.
      
 0.446
CFAP57
Cilia-and flagella-associated protein 57.
      
 0.430
TTC26
Tetratricopeptide repeat domain 26.
      
 0.422
LOC110470230
Noggin-2-like.
      
 0.401
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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