STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110472330Ovostatin. (1471 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
 0.660
CBX2
Chromobox 2.
    
 0.653
CBX4
E3 SUMO-protein ligase CBX4.
    
 0.649
RNF2
E3 ubiquitin-protein ligase RING2.
    
 0.646
PHC2_0
Polyhomeotic-like protein 2.
    
 0.602
LOC110470611-2
Polycomb complex protein BMI-1.
    
 0.582
PCGF2
Polycomb group RING finger protein 2.
    
 0.582
SCML2
Sex comb on midleg-like protein 2.
    
 0.564
SCMH1
Polycomb protein SCMH1.
    
 0.564
LOC110468760
Vitellogenin-2.
   
  
 0.534
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.