STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C6General transcription factor 3C polypeptide 6. (270 aa)    
Predicted Functional Partners:
GTF3C5
General transcription factor 3C polypeptide 5.
   
 0.909
GTF3C4
General transcription factor 3C polypeptide 4.
    
 0.876
GTF3C1
General transcription factor 3C polypeptide 1.
    
 0.855
GTF3C3
General transcription factor 3C polypeptide 3.
    
 0.787
GTF3C2
General transcription factor 3C polypeptide 2.
    
 0.772
ZNF512B
Zinc finger protein 512B.
    
 0.652
ZNF512
Zinc finger protein 512.
    
 0.652
SERBP1
Plasminogen activator inhibitor 1 RNA-binding protein.
      
 0.582
GUCY2C
Guanylate cyclase.
      
 0.577
MT-CYB
Mitochondrially encoded cytochrome b.
      
 0.517
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.