Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MAD1L1Mitotic spindle assembly checkpoint protein MAD1. (717 aa)    
Predicted Functional Partners:
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
    
 0.999
CDC20
Cell division cycle protein 20.
   
 0.994
TTK
Dual specificity protein kinase TTK.
    
 0.993
FZR1
Fizzy-related.
   
 0.988
ENSLSDP00000019602
annotation not available
    
 0.987
BUB3
Mitotic checkpoint protein BUB3.
    
 0.963
BUB1B
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
    
 0.941
PLK1
Serine/threonine-protein kinase PLK.
    
 0.937
MAD2L2
Mitotic spindle assembly checkpoint protein MAD2B.
     
 0.929
NUDC
Nuclear migration protein nudC.
    
  0.924
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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