Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MDFICMyoD family inhibitor domain-containing protein. (248 aa)    
Predicted Functional Partners:
ANKRD9
Ankyrin repeat domain-containing protein 9.
    
 
 0.570
BAZ1A
Bromodomain adjacent to zinc finger domain protein 1A.
      
 0.567
MAP3K1
Mitogen-activated protein kinase kinase kinase 1.
      
 0.565
MTMR3
Myotubularin-related protein 3.
      
 0.539
ENSLSDP00000007623
annotation not available
    
   0.490
PIEZO1
Piezo-type mechanosensitive ion channel component.
    
   0.490
PIEZO2
Piezo-type mechanosensitive ion channel component.
    
   0.490
LOC110472819
Ankyrin repeat domain-containing protein 9.
    
 
 0.437
TRMT61A
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
      
 0.421
CTCF
Transcriptional repressor CTCF.
    
 
 0.410
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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