STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPY30Protein dpy-30. (99 aa)    
Predicted Functional Partners:
ASH2L
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.995
RBBP5
Retinoblastoma-binding protein 5.
    
 0.995
SETD1B
Histone-lysine N-methyltransferase SETD1B.
    
 0.991
CXXC1
CXXC-type zinc finger protein 1.
    
 0.959
WDR5
WD repeat-containing protein 5.
   
 0.946
DIDO1
Death-inducer obliterator 1.
    
 
 0.915
WDR82
WD repeat-containing protein 82.
   
 0.897
KMT2A
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
    
 0.855
GSC
Homeobox protein goosecoid.
    
   0.844
UBA52
Ubiquitin-60S ribosomal protein L40.
   
   0.828
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.