STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELFN1Protein ELFN1. (796 aa)    
Predicted Functional Partners:
UNC79
Protein unc-79.
    
 0.777
E2F6
Transcription factor E2F6.
    
 0.550
NOM1
Nucleolar MIF4G domain-containing protein 1.
      
 0.531
LOC110478774
E3 SUMO-protein ligase RanBP2.
    
 0.522
SETDB1
Histone-lysine N-methyltransferase SETDB1.
   
 0.500
TRPM1
Transient receptor potential cation channel subfamily M member 3.
      
 0.480
TRPM3
Transient receptor potential cation channel subfamily M member 3.
      
 0.480
KDM6A
Lysine-specific demethylase 6A.
    
 0.456
KDM6B
Lysine-specific demethylase 6B.
    
 0.456
GATA1
Erythroid transcription factor-like.
    
 0.441
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.