Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ELFN1Protein ELFN1. (796 aa)    
Predicted Functional Partners:
E2F6
Transcription factor E2F6.
    
 
 0.685
NOM1
Nucleolar MIF4G domain-containing protein 1.
      
 0.677
SMC1A
Structural maintenance of chromosomes protein 1A.
   
 0.671
SMC1B
Structural maintenance of chromosomes protein.
   
 0.671
UNC79
Protein unc-79.
    
 0.634
PVALB
Parvalbumin, muscle; Belongs to the parvalbumin family.
   
 0.616
LRIT3
Visual pigment-like receptor peropsin; Belongs to the G-protein coupled receptor 1 family.
    
 0.615
ASH1L
Histone-lysine N-methyltransferase ASH1L.
   
 0.598
TRIP11
Thyroid receptor-interacting protein 11.
    
 0.592
PWWP2B
PWWP domain-containing protein 2B.
      
 0.589
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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