Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYL3Myosin light chain 1, cardiac muscle. (166 aa)    
Predicted Functional Partners:
LOC110481825
Myosin-6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.957
LOC110478077
Myosin-6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.957
LOC110479532
Myosin-7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.957
MYH7
Myosin heavy chain 6/7.
   
 0.957
MYLK
Myosin light chain kinase, smooth muscle.
   
 0.934
ACTC1
Actin, alpha cardiac muscle 1.
   
 0.929
MYLK4
Myosin light chain kinase family member 4.
   
 0.926
MYLK3
Myosin light chain kinase 3.
   
 0.921
MYL4
Myosin light chain, embryonic.
  
  
 
0.901
MYH10
Myosin-10; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.872
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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