STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMYA5Cardiomyopathy-associated protein 5. (3968 aa)    
Predicted Functional Partners:
PASK
PAS domain-containing serine/threonine-protein kinase.
    
 0.555
ENSLSDP00000018066
annotation not available
    
 
 0.534
DSG2
Desmoglein-2.
      
 0.529
PTPRJ
Receptor-type tyrosine-protein phosphatase eta.
      
 0.529
HEG1
Protein HEG 1.
  
 
 0.486
RIPOR2
Protein FAM65B.
    
 0.476
MYOZ2
Myozenin-2.
   
  
 0.474
MYOM2
M-protein, striated muscle.
   
 
 0.469
LOC110469698
Uncharacterized protein.
  
  0.463
LOC110477815
Keratin, type II cytoskeletal 75; Belongs to the intermediate filament family.
  
 
  0.433
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.