STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CMYA5Cardiomyopathy-associated protein 5. (3968 aa)    
Predicted Functional Partners:
NRAP
Nebulin-related-anchoring protein.
   
 
 0.914
TRDN
Triadin.
   
 0.833
PASK
PAS domain-containing serine/threonine-protein kinase.
    
 0.690
ACSF3
Acyl-CoA synthetase family member 3, mitochondrial.
      
 0.678
MYOZ2
Myozenin-2.
   
  
 0.590
SMYD4
SET and MYND domain-containing protein 4.
   
 0.577
MYOM1
M-protein, striated muscle.
   
 0.573
TRMT112
Multifunctional methyltransferase subunit TRM112-like protein.
      
 0.568
SMYD1
Histone-lysine N-methyltransferase SMYD1.
   
 0.566
FASTKD3
FAST kinase domain-containing protein 3.
      
 0.566
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.