STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MFSD4BSodium-dependent glucose transporter 1. (491 aa)    
Predicted Functional Partners:
MFSD9
Major facilitator superfamily domain-containing protein 9.
      
 0.719
SLC29A3
Equilibrative nucleoside transporter 3.
      
 0.562
DPH6
Diphthine--ammonia ligase.
    
   0.508
GIPC3
PDZ domain-containing protein GIPC3.
     
 0.454
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
    
 
 0.448
LOC110475671
Putative transporter SVOPL.
      
 0.447
SVOPL
Putative transporter SVOPL.
      
 0.447
MFSD10
Major facilitator superfamily domain-containing protein 10.
      
 0.444
SLC46A2
Thymic stromal cotransporter.
    
 
 0.441
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.