Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLEC16AProtein CLEC16A. (1040 aa)    
Predicted Functional Partners:
RNF41
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase NRDP1.
    
 
 0.835
VPS26B
Vacuolar protein sorting-associated protein 26B.
    
 
 0.739
DEXI
Dexamethasone-induced protein.
      
 0.694
USP8
Ubiquitin carboxyl-terminal hydrolase 8; Belongs to the peptidase C19 family.
      
 0.574
TBC1D14
TBC1 domain family member 14.
      
 0.567
TBC1D12
TBC1 domain family member 12.
      
 0.567
WDR44
WD repeat-containing protein 44.
      
 0.566
ZNF280D
Zinc finger protein 280D.
      
 0.552
SH2B3
SH2B adapter protein 3.
      
 0.540
AQR
Intron-binding protein aquarius.
      
 0.539
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.