STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001557annotation not available (644 aa)    
Predicted Functional Partners:
PTP4A1
Protein tyrosine phosphatase type IVA 1.
    
 
 0.661
ARL15
ADP-ribosylation factor-like protein 15.
   
 
 0.611
GMPS
GMP synthase [glutamine-hydrolyzing].
    
 0.589
ATIC
Bifunctional purine biosynthesis protein PURH.
    
 0.529
NT5E
Snake venom 5'-nucleotidase; Belongs to the 5'-nucleotidase family.
    
 0.514
TMEM241
Transmembrane protein 241.
   
  
 0.469
PTP4A3
Protein tyrosine phosphatase type IVA 3.
    
 
 0.437
ANO6
Anoctamin.
      
 0.431
MCM8
DNA helicase MCM8; Belongs to the MCM family.
   
  
 0.419
BAG5
BAG family molecular chaperone regulator 5.
   
  
 0.416
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.