STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001561annotation not available (273 aa)    
Predicted Functional Partners:
LOC110481576
Cytochrome P450 3A40; Belongs to the cytochrome P450 family.
  
 0.585
AASDH
Acyl-CoA synthetase family member 4.
  
 0.571
WRN
Werner syndrome ATP-dependent helicase.
    
 0.556
LOC110469847
Cytochrome P450 4B1; Belongs to the cytochrome P450 family.
  
 0.536
LOC110469854
Cytochrome P450 4B1.
  
 0.530
LOC110473893
25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial; Belongs to the cytochrome P450 family.
  
 
 0.525
LOC110482554
Cytochrome P450 4F22; Belongs to the cytochrome P450 family.
  
 0.513
LOC110474232
Aromatase; Belongs to the cytochrome P450 family.
  
 
 0.513
CYP26B1
Cytochrome P450 26B1; Belongs to the cytochrome P450 family.
  
 0.498
CYP24A1
1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; Belongs to the cytochrome P450 family.
  
 
 0.491
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.