STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESRP2Epithelial splicing regulatory protein 2. (727 aa)    
Predicted Functional Partners:
ESRP1
Epithelial splicing regulatory protein 1.
   
 
  0.773
RBPMS
RNA-binding protein with multiple splicing.
    
 
 0.770
RBPMS2
RNA-binding protein with multiple splicing.
    
 0.737
ENAH
Protein enabled.
   
  
 0.694
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
     
 0.624
RRM1
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
      
 0.574
LSM14B
Protein LSM14 B.
      
 0.554
RBFOX2
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
     
 0.533
QKI
Protein quaking.
    
 0.526
TMED8
Protein TMED8.
      
 0.525
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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