STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC9Trafficking protein particle complex subunit 9. (1060 aa)    
Predicted Functional Partners:
TRAPPC1
Trafficking protein particle complex 1.
    
 0.991
TRAPPC2L
Trafficking protein particle complex subunit 2-like protein.
    
 0.991
TRAPPC10
Trafficking protein particle complex subunit 10.
   
 0.991
TRAPPC6B
Trafficking protein particle complex subunit 6B.
   
 0.988
TRAPPC8
Trafficking protein particle complex subunit 8.
   
 0.988
TRAPPC2
Trafficking protein particle complex subunit 2.
    
 0.986
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.982
TRAPPC4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.981
TRAPPC3L
Trafficking protein particle complex subunit 3-like protein.
    
 0.936
TRAPPC3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.936
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.