STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTX3Metaxin. (369 aa)    
Predicted Functional Partners:
SAMM50
Sorting and assembly machinery component 50.
   
 0.978
TOMM40L
Mitochondrial import receptor subunit TOM40B.
   
 0.931
MTX2
Metaxin-2.
    
0.828
TOMM7
Mitochondrial import receptor subunit TOM7.
    
 0.734
TOMM22
Mitochondrial import receptor subunit TOM22.
    
 0.729
TOMM20
Mitochondrial import receptor subunit TOM20.
    
 0.726
SLC39A3
Zinc transporter ZIP3.
    
 
 0.629
SLC39A1
Zinc transporter ZIP1.
    
 
 0.629
DNAJC11
DnaJ subfamily C member 11.
    
 0.580
TOMM70
Mitochondrial import receptor subunit TOM70.
    
 0.575
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.