STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001578annotation not available (184 aa)    
Predicted Functional Partners:
FOXP2
Forkhead box protein P2.
 
      0.879
HTT
Huntingtin.
   
 
 0.581
CDH7
Cadherin-7; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.532
SLIT1
Slit 1 protein.
      
 0.532
RTN4R
Reticulon-4 receptor.
      
 0.532
LINGO1
Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein.
      
 0.532
PLXNC1
Plexin-C1.
      
 0.532
CBFB
Core-binding factor subunit beta.
    
 0.531
FOXP4
Forkhead box protein P4.
    
 
0.454
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.