Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
FAM174AMembrane protein FAM174A. (189 aa)    
Predicted Functional Partners:
TMEM168
Transmembrane protein 168.
    
   0.610
ENSLSDP00000020170
annotation not available
      
 0.549
SHB
SH2 domain-containing adapter protein B.
      
 0.527
SLCO4C1
Solute carrier organic anion transporter family member 4C1.
      
 0.513
ADGRF5
Putative G-protein coupled receptor 116; Belongs to the G-protein coupled receptor 2 family.
      
 0.454
EPC2
Enhancer of polycomb homolog.
      
 0.452
CREG1
Protein CREG1; Belongs to the CREG family.
      
 0.442
RIOK2
Serine/threonine-protein kinase RIO2.
      
 0.436
GLYATL3_0
Glycine N-acyltransferase-like protein 3.
      
 0.428
EIF2S2
Eukaryotic translation initiation factor 2 subunit 2.
      
 0.420
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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