VRK3 protein (Lonchura striata) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Experiments

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[Homology]

Score

VRK3

Inactive serine/threonine-protein kinase VRK3-like. (325 aa)

Predicted Functional Partners:

DUSP3

0.790

LTV1

0.789

BYSL

0.714

RIOK2

0.698

SOST

0.685

FAM83H

0.628

ENSLSDP00000008068

0.613

NOB1

0.602

TSR1-2

0.596

TSR1

0.596

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BYSL	ENSLSDP00000008068	ENSLSDP00000023850	ENSLSDP00000008068	Bystin.	annotation not available	0.989
BYSL	LTV1	ENSLSDP00000023850	ENSLSDP00000014094	Bystin.	Protein LTV1.	0.999
BYSL	NOB1	ENSLSDP00000023850	ENSLSDP00000006003	Bystin.	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.999
BYSL	RIOK2	ENSLSDP00000023850	ENSLSDP00000012374	Bystin.	Serine/threonine-protein kinase RIO2.	0.995
BYSL	TSR1	ENSLSDP00000023850	ENSLSDP00000018372	Bystin.	Pre-rRNA-processing protein TSR1.	0.993
BYSL	TSR1-2	ENSLSDP00000023850	ENSLSDP00000018360	Bystin.	Pre-rRNA-processing protein TSR1 homolog.	0.993
BYSL	VRK3	ENSLSDP00000023850	ENSLSDP00000001604	Bystin.	Inactive serine/threonine-protein kinase VRK3-like.	0.714
DUSP3	VRK3	ENSLSDP00000008159	ENSLSDP00000001604	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Inactive serine/threonine-protein kinase VRK3-like.	0.790
ENSLSDP00000008068	BYSL	ENSLSDP00000008068	ENSLSDP00000023850	annotation not available	Bystin.	0.989
ENSLSDP00000008068	LTV1	ENSLSDP00000008068	ENSLSDP00000014094	annotation not available	Protein LTV1.	0.986
ENSLSDP00000008068	NOB1	ENSLSDP00000008068	ENSLSDP00000006003	annotation not available	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.998
ENSLSDP00000008068	RIOK2	ENSLSDP00000008068	ENSLSDP00000012374	annotation not available	Serine/threonine-protein kinase RIO2.	0.986
ENSLSDP00000008068	TSR1	ENSLSDP00000008068	ENSLSDP00000018372	annotation not available	Pre-rRNA-processing protein TSR1.	0.985
ENSLSDP00000008068	TSR1-2	ENSLSDP00000008068	ENSLSDP00000018360	annotation not available	Pre-rRNA-processing protein TSR1 homolog.	0.985
ENSLSDP00000008068	VRK3	ENSLSDP00000008068	ENSLSDP00000001604	annotation not available	Inactive serine/threonine-protein kinase VRK3-like.	0.613
FAM83H	VRK3	ENSLSDP00000008356	ENSLSDP00000001604	Protein FAM83H.	Inactive serine/threonine-protein kinase VRK3-like.	0.628
LTV1	BYSL	ENSLSDP00000014094	ENSLSDP00000023850	Protein LTV1.	Bystin.	0.999
LTV1	ENSLSDP00000008068	ENSLSDP00000014094	ENSLSDP00000008068	Protein LTV1.	annotation not available	0.986
LTV1	NOB1	ENSLSDP00000014094	ENSLSDP00000006003	Protein LTV1.	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.999
LTV1	RIOK2	ENSLSDP00000014094	ENSLSDP00000012374	Protein LTV1.	Serine/threonine-protein kinase RIO2.	0.999