STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC65Coiled-coil domain-containing protein 65. (543 aa)    
Predicted Functional Partners:
DNAI2
Dynein intermediate chain 2, axonemal.
   
 0.925
CCDC40
Coiled-coil domain-containing protein 40.
  
 
 0.920
CCDC39
Coiled-coil domain-containing protein 39.
   
 
 0.917
RSPH1
Radial spoke head 1.
   
 
 0.916
GAS8
Growth arrest-specific protein 8.
  
 
 0.915
NME8
Thioredoxin domain-containing protein 3; Belongs to the NDK family.
   
 
 0.908
DRC3
Leucine-rich repeat-containing protein 48.
   
 
 0.908
CFAP161
Uncharacterized protein C15orf26.
   
 
 0.896
IQCG
IQ domain-containing protein G.
   
 
 0.893
ENKUR
Enkurin.
   
 
 0.890
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.