STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC65Coiled-coil domain-containing protein 65. (543 aa)    
Predicted Functional Partners:
GAS8
Growth arrest-specific protein 8.
  
 
 
 0.768
CCDC40
Coiled-coil domain-containing protein 40.
  
 
 0.739
DNAI1
Dynein intermediate chain 1, axonemal.
   
  
 0.706
DNALI1
Axonemal dynein light intermediate polypeptide 1.
    
 
 0.688
CCDC103
Coiled-coil domain-containing protein 103.
   
 
 0.667
RSPH14
Rhabdoid tumor deletion region protein 1.
   
 
 0.662
ARMC4
Armadillo repeat-containing protein 4.
   
 
 0.660
CCDC39
Coiled-coil domain-containing protein 39.
   
 
 0.660
DRC3
Leucine-rich repeat-containing protein 48.
   
  
 0.626
RSPH1
Radial spoke head 1.
    
 
 0.588
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.