Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FKBP11Peptidylprolyl isomerase. (198 aa)    
Predicted Functional Partners:
HSP90B1
Endoplasmin.
   
 0.757
STT3A
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A.
   
 
 0.702
RPL7
60S ribosomal protein L7.
   
 
 0.688
SSR4
Translocon-associated protein subunit delta.
   
 
 0.682
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]
   
 
 0.673
SSR1
Translocon-associated protein subunit alpha.
   
 
 0.668
KRTCAP2
Keratinocyte-associated protein 2.
   
   0.662
SEC61G
Protein transport protein Sec61 subunit gamma.
   
 
 0.657
RPL36
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 
 0.651
LOC110471594
Translocon-associated protein subunit beta; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins.
   
 
 0.650
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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