Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001617annotation not available (109 aa)    
Predicted Functional Partners:
IL17RA
Interleukin-17 receptor A.
    
 0.924
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.872
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.789
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.787
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta.
    
 
 0.750
TRAF3IP2
Adapter protein CIKS.
 
      0.717
IRAK4
Interleukin-1 receptor-associated kinase 4.
    
 0.581
TRAF1
TNF receptor associated factor 1.
    
 0.573
TRAF2
TNF receptor-associated factor.
    
 0.573
NFKBIA
NF-kappa-B inhibitor alpha.
    
 0.556
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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