STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHRNGAcetylcholine receptor subunit gamma. (501 aa)    
Predicted Functional Partners:
CHRNA5
Neuronal acetylcholine receptor subunit alpha-5.
   
 0.819
CHRNB3
Neuronal acetylcholine receptor subunit beta-3.
   
 0.750
CHRNA4
Neuronal acetylcholine receptor subunit alpha-4.
    
 0.726
CHRNA2
Cholinergic receptor nicotinic alpha 2 subunit.
    
 0.726
CHRNA1
Acetylcholine receptor subunit alpha.
   
 0.670
LYPD6B
Ly6/PLAUR domain-containing protein 6B.
    
 0.659
LYPD6
Ly6/PLAUR domain-containing protein 6.
    
 0.659
LOC110472313
Neuronal acetylcholine receptor subunit alpha-7.
   
  0.533
LOC110471410
Neuronal acetylcholine receptor subunit alpha-7.
   
  0.533
ULK4_1
Serine/threonine-protein kinase ULK4.
      
 0.446
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.