Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ARHGAP23Rho GTPase-activating protein 23. (1261 aa)    
Predicted Functional Partners:
CCDC51
Coiled-coil domain-containing protein 51.
      
 0.691
CCDC85A
Coiled-coil domain-containing protein 85A.
    
 
 0.682
CCDC85C
Coiled-coil domain-containing protein 85C.
    
 
 0.626
FNBP1
Formin-binding protein 1.
    
 0.597
ETF1
Eukaryotic peptide chain release factor subunit 1.
      
 0.568
KRTCAP2
Keratinocyte-associated protein 2.
      
 0.568
GRSF1
G-rich sequence factor 1.
   
  
 0.537
TMEM200A
Transmembrane protein 200A.
      
 0.525
ZNF706
Zinc finger protein 706.
      
 0.512
FRMD4A
FERM domain-containing protein 4A.
      
 0.503
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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