Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCRIP2Protein FAM195A. (144 aa)    
Predicted Functional Partners:
DDX6
Putative ATP-dependent RNA helicase DDX6.
    
 
 0.931
CCNDBP1
Cyclin-D1-binding protein 1.
    
   0.806
ATXN2
Ataxin-2.
    
   0.730
FAM98A
Protein FAM98A.
      
 0.566
CYC1
Cytochrome c1, heme protein, mitochondrial.
   
    0.534
NDUFV1
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
    0.529
NDUFS8
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
   
    0.522
QSER1
Glutamine and serine-rich protein 1.
      
 0.504
B4GAT1
Beta-1,4-glucuronyltransferase 1.
      
 0.496
RASGRP3
Ras guanyl-releasing protein 3.
      
 0.437
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.