STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
METTL26UPF0585 protein C16orf13. (184 aa)    
Predicted Functional Partners:
EMILIN1
EMILIN-1.
      
 0.570
CSRNP1
Cysteine/serine-rich nuclear protein 1.
      
 0.568
CNPY2
Protein canopy 2.
      
 0.546
FAM160A1
Protein FAM160A1.
      
 0.542
METTL25
Methyltransferase-like protein 25.
      
 0.535
SLAIN2
SLAIN motif-containing protein 2.
      
 0.522
NDUFA3
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 3.
      
 0.453
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
  
 0.451
METTL27
Williams-Beuren syndrome chromosomal region 27 protein.
   
  
 0.448
AFMID
Arylformamidase.
      
 0.437
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.