Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF277Zinc finger protein 277. (441 aa)    
Predicted Functional Partners:
GNG11
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
   0.829
PDCD2L
Programmed cell death protein 2-like.
   
 
 0.779
RSRC2
Arginine/serine-rich coiled-coil protein 2.
    
 
 0.726
PDCD2
Programmed cell death protein 2.
   
 
 0.716
TMEM186
Transmembrane protein 186.
      
 0.654
ZNF622
Zinc finger protein 622.
   
  
 0.602
ZMAT2
Zinc finger matrin-type protein 2.
      
 0.577
TMEM258
Transmembrane protein 258.
      
 0.568
SF3A2
Splicing factor 3A subunit 2.
      
 0.567
PEX6
Peroxisome assembly factor 2.
      
 0.529
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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