Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GPR179Putative G-protein coupled receptor 158. (2308 aa)    
Predicted Functional Partners:
LRIT3
Visual pigment-like receptor peropsin; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.605
TRAK1
Trafficking kinesin-binding protein 1.
      
 0.594
GNB5
Guanine nucleotide-binding protein subunit beta-5.
    
 0.589
COMMD9
COMM domain-containing protein 9.
    
 
 0.587
DHX8
ATP-dependent RNA helicase DHX8.
      
 0.546
LDLRAD3
Low-density lipoprotein receptor class A domain-containing protein 3.
      
 0.543
NME8
Thioredoxin domain-containing protein 3; Belongs to the NDK family.
    
   0.539
NYX
Nyctalopin.
    
 
 0.525
CABP4
Calcium-binding protein 4.
    
 
 0.512
WDR90
WD repeat-containing protein 90.
    
   0.507
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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