STK38 protein (Lonchura striata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

STK38

Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (475 aa)

Predicted Functional Partners:

MOB2

0.791

MOB1B

0.757

S100B

0.727

FRYL

0.694

FRY

0.694

CDC14B

0.643

CDC14A

0.643

ARPP19

0.637

ENSA

0.637

GAS7

0.609

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARPP19	ENSA	ENSLSDP00000020329	ENSLSDP00000022455	cAMP-regulated phosphoprotein 19; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family.	Alpha-endosulfine.	0.977
ARPP19	STK38	ENSLSDP00000020329	ENSLSDP00000001671	cAMP-regulated phosphoprotein 19; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.637
CDC14A	CDC14B	ENSLSDP00000025188	ENSLSDP00000018299	Dual specificity protein phosphatase CDC14A.	Dual specificity protein phosphatase CDC14B.	0.922
CDC14A	GAS7	ENSLSDP00000025188	ENSLSDP00000009339	Dual specificity protein phosphatase CDC14A.	Growth arrest-specific protein 7.	0.574
CDC14A	STK38	ENSLSDP00000025188	ENSLSDP00000001671	Dual specificity protein phosphatase CDC14A.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.643
CDC14B	CDC14A	ENSLSDP00000018299	ENSLSDP00000025188	Dual specificity protein phosphatase CDC14B.	Dual specificity protein phosphatase CDC14A.	0.922
CDC14B	GAS7	ENSLSDP00000018299	ENSLSDP00000009339	Dual specificity protein phosphatase CDC14B.	Growth arrest-specific protein 7.	0.574
CDC14B	STK38	ENSLSDP00000018299	ENSLSDP00000001671	Dual specificity protein phosphatase CDC14B.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.643
ENSA	ARPP19	ENSLSDP00000022455	ENSLSDP00000020329	Alpha-endosulfine.	cAMP-regulated phosphoprotein 19; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family.	0.977
ENSA	STK38	ENSLSDP00000022455	ENSLSDP00000001671	Alpha-endosulfine.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.637
FRY	STK38	ENSLSDP00000025848	ENSLSDP00000001671	Protein furry.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.694
FRYL	STK38	ENSLSDP00000010412	ENSLSDP00000001671	Protein furry-like.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.694
GAS7	CDC14A	ENSLSDP00000009339	ENSLSDP00000025188	Growth arrest-specific protein 7.	Dual specificity protein phosphatase CDC14A.	0.574
GAS7	CDC14B	ENSLSDP00000009339	ENSLSDP00000018299	Growth arrest-specific protein 7.	Dual specificity protein phosphatase CDC14B.	0.574
GAS7	STK38	ENSLSDP00000009339	ENSLSDP00000001671	Growth arrest-specific protein 7.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.609
MOB1B	STK38	ENSLSDP00000025876	ENSLSDP00000001671	MOB kinase activator 1B.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.757
MOB2	STK38	ENSLSDP00000016713	ENSLSDP00000001671	MOB kinase activator 2.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.791
S100B	STK38	ENSLSDP00000002254	ENSLSDP00000001671	Protein S100-B; Belongs to the S-100 family.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.727
STK38	ARPP19	ENSLSDP00000001671	ENSLSDP00000020329	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	cAMP-regulated phosphoprotein 19; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family.	0.637
STK38	CDC14A	ENSLSDP00000001671	ENSLSDP00000025188	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Dual specificity protein phosphatase CDC14A.	0.643