STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4539S ribosomal protein L45, mitochondrial. (200 aa)    
Predicted Functional Partners:
MRPL15
39S ribosomal protein L15, mitochondrial.
   
   0.948
MRPL47
39S ribosomal protein L47, mitochondrial.
   
 
 0.942
MRPL49
39S ribosomal protein L49, mitochondrial.
   
 
 0.942
MRPL22
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.936
MRPL12
39S ribosomal protein L12, mitochondrial.
   
 
 0.933
MRPL41
39S ribosomal protein L41, mitochondrial.
   
 0.926
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 
 0.922
MRPS18B
28S ribosomal protein S18b, mitochondrial.
   
 
 0.921
MRPL11
39S ribosomal protein L11, mitochondrial.
   
 0.920
MRPL13
39S ribosomal protein L13, mitochondrial.
   
 
 0.916
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.