STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4539S ribosomal protein L45, mitochondrial. (200 aa)    
Predicted Functional Partners:
MRPL49
39S ribosomal protein L49, mitochondrial.
   
 
 0.956
MRPL48
39S ribosomal protein L48, mitochondrial.
   
 
 0.949
MRPL15
39S ribosomal protein L15, mitochondrial.
   
   0.946
NDUFAB1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.944
MRPL47
39S ribosomal protein L47, mitochondrial.
   
 
 0.943
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 
 0.943
MRPL40
39S ribosomal protein L40, mitochondrial.
   
 
 0.938
MRPL39
39S ribosomal protein L39, mitochondrial.
   
 
 0.938
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
 
 0.929
MRPL22
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.925
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.