Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NPEPPSPuromycin-sensitive aminopeptidase. (451 aa)    
Predicted Functional Partners:
AGT
Angiotensinogen; Belongs to the serpin family.
   
 0.828
LRRC8A
Volume-regulated anion channel subunit LRRC8A.
    
  0.767
LRRC8B
Volume-regulated anion channel subunit LRRC8B.
    
  0.719
MAPT
Microtubule associated protein tau.
    
 
 0.699
XPNPEP3
Putative Xaa-Pro aminopeptidase 3.
  
 
 0.597
METAP1
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
   
 
 0.589
BLMH
Bleomycin hydrolase; Belongs to the peptidase C1 family.
    
 0.581
DNPEP
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
      
 0.545
THOP1
Thimet oligopeptidase.
  
  
 0.542
NLN
Neurolysin, mitochondrial.
  
  
 0.542
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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