STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRR35Proline rich 35. (573 aa)    
Predicted Functional Partners:
RRP36
Ribosomal RNA processing protein 36.
      
 0.580
KBTBD12
Kelch repeat and BTB domain-containing protein 12.
      
 0.577
KCNG3
Potassium voltage-gated channel subfamily G member 3; Belongs to the potassium channel family.
   
  
 0.564
SIPA1L2
Signal-induced proliferation-associated 1-like protein 2.
      
 0.548
RAB11FIP3
Rab11 family-interacting protein 3.
      
 0.543
TRAPPC6B
Trafficking protein particle complex subunit 6B.
      
 0.539
VWC2
Brorin.
      
 0.528
TMEM43
Transmembrane protein 43.
      
 0.527
IFT140
Intraflagellar transport protein 140.
      
 0.526
KLHDC8B
Kelch domain-containing protein 8B.
      
 0.526
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.