STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNGA1Cyclic nucleotide-gated channel rod photoreceptor subunit alpha. (634 aa)    
Predicted Functional Partners:
CALML3
Calmodulin, striated muscle.
     
 0.928
CALM2
Calmodulin; Belongs to the calmodulin family.
     
 0.928
CNGB3
Cyclic nucleotide-gated cation channel beta-3.
  
0.921
CNGB1
Cyclic nucleotide-gated cation channel beta-1.
  
0.920
CALML4
Calmodulin-like protein 4.
     
 0.917
NFXL1
NF-X1-type zinc finger protein NFXL1.
 
    
 0.641
GUCA1B
Guanylyl cyclase-activating protein 2.
   
 
 0.627
PDE6B
Phosphodiesterase.
   
 0.588
GNG11
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
  
 0.577
LOC110479583
Guanylyl cyclase-activating protein 1.
   
 
 0.551
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.