Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC32Leucine-rich repeat-containing protein 32. (672 aa)    
Predicted Functional Partners:
TGFB3
Transforming growth factor beta-3.
    
 0.970
TGFB2
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.907
ENSLSDP00000008873
Transforming growth factor beta-1 proprotein-like.
    
  0.901
DCBLD2
Discoidin, CUB and LCCL domain-containing protein 2.
      
 0.480
MED22
Mediator of RNA polymerase II transcription subunit 22.
      
 0.444
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
   
 0.430
RABEP1
Rab GTPase-binding effector protein 1.
      
 0.416
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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