STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMA4Laminin subunit alpha-4. (1826 aa)    
Predicted Functional Partners:
ITGA6
Integrin alpha-6; Belongs to the integrin alpha chain family.
    
 0.954
ITGB4
Integrin beta.
   
 0.949
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.945
ITGA9
Integrin alpha-9; Belongs to the integrin alpha chain family.
    
 0.932
ITGAV
Integrin alpha-V; Belongs to the integrin alpha chain family.
    
 0.932
DAG1
Dystroglycan.
    
 0.930
ITGA1
Integrin alpha-1; Belongs to the integrin alpha chain family.
   
 0.924
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.922
ITGA2
Integrin alpha-2; Belongs to the integrin alpha chain family.
    
 0.921
SV2B
Synaptic vesicle glycoprotein 2B.
     
 0.905
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.