Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PI16Peptidase inhibitor 16; Belongs to the CRISP family. (971 aa)    
Predicted Functional Partners:
GART
Trifunctional purine biosynthetic protein adenosine-3.
    
  0.777
LOC110479231
Trifunctional purine biosynthetic protein adenosine-3.
    
  0.777
TRIP11
Thyroid receptor-interacting protein 11.
   
  
 0.570
DPP4
Dipeptidyl peptidase 4; Belongs to the peptidase S9B family.
      
 0.568
MSMB
Beta-microseminoprotein.
    
 
 0.491
GKN2
Gastrokine-2.
      
 0.468
ENO4
Enolase-like protein ENO4.
   
  
 0.461
ACKR4
Atypical chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family.
      
 0.449
NAALADL2
Inactive N-acetylated-alpha-linked acidic dipeptidase-like protein 2.
      
 0.436
ULK3
Serine/threonine-protein kinase ULK3; Belongs to the protein kinase superfamily.
      
 0.423
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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