STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001731annotation not available (145 aa)    
Predicted Functional Partners:
P4HB
Protein disulfide-isomerase.
   
 0.763
PDIA2
Protein disulfide-isomerase A2.
   
 0.763
LOC110482106
Kinesin-like protein KIF21A.
    
   0.707
KIF21A
Kinesin-like protein KIF21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
   0.707
ACTR6
Actin-related protein 6; Belongs to the actin family.
    
   0.649
ENSLSDP00000007184
annotation not available
    
 
 0.647
PROKR1
Prokineticin receptor 2; Belongs to the G-protein coupled receptor 1 family.
      
 0.564
EP400
E1A-binding protein p400.
    
 
 0.552
NUDT4
Diphosphoinositol polyphosphate phosphohydrolase 2.
      
 0.546
P4HTM
Transmembrane prolyl 4-hydroxylase.
      
 0.531
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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