Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001732annotation not available (725 aa)    
Predicted Functional Partners:
AK9
Adenylate kinase 9.
    
   0.487
ENSLSDP00000001381
annotation not available
  
     0.466
RLOC_00001804
Uncharacterized protein.
  
     0.458
SSPO
SCO-spondin.
  
     0.443
ENSLSDP00000022436
annotation not available
  
     0.433
COL9A1
Collagen alpha-1(IX) chain.
  
     0.424
ENSLSDP00000016401
annotation not available
  
     0.422
MARCO
Macrophage receptor with collagenous structure.
  
     0.416
ENSLSDP00000011214
annotation not available
  
     0.414
ENSLSDP00000001401
annotation not available
  
     0.413
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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