Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSKUTsukushin. (362 aa)    
Predicted Functional Partners:
P2RY2
P2Y purinoceptor 2; Belongs to the G-protein coupled receptor 1 family.
  
   
 0.734
ISY1
Pre-mRNA-splicing factor ISY1.
    
 
 0.667
HSPA13
Heat shock protein 13.
    
 
 0.581
ACER3
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
      
 0.569
ARHGEF17
Rho guanine nucleotide exchange factor 17.
   
  
 0.569
P2RY6
P2Y purinoceptor 3.
      
 0.569
EPDR1
Mammalian ependymin-related protein 1.
      
 0.566
FZD4
Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 
 0.565
FCHSD2
F-BAR and double SH3 domains protein 2.
     
 0.553
RAB19
Ras-related protein Rab-19.
    
 
 0.549
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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