Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CHRNDSerine protease 56; Belongs to the peptidase S1 family. (873 aa)    
Predicted Functional Partners:
TMEM98
Transmembrane protein 98.
      
 0.692
MFRP
Membrane frizzled-related protein.
    
 
 0.674
MAIP1
Uncharacterized protein C2orf47, mitochondrial.
      
 0.649
ZNF644
Zinc finger protein 644.
    
 
 0.590
STOX2
Storkhead-box protein 2.
      
 0.584
CTDP1
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
      
 0.571
WDR26
WD repeat-containing protein 26.
      
 0.571
METTL11B
Alpha N-terminal protein methyltransferase 1B.
      
 0.568
RD3L
Protein RD3-like.
      
 0.532
NEPRO
Uncharacterized protein C3orf17.
      
 0.521
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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