Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ID2DNA-binding protein inhibitor ID-2. (134 aa)    
Predicted Functional Partners:
MYOG
Myogenin.
    
 
 0.850
GATA3
GATA-binding factor 3.
    
 0.726
ASCL4
Achaete-scute 4.
    
 0.723
MYF6
Myogenic factor 6.
    
   0.717
SKP2
S-phase kinase-associated protein 2.
      
 0.668
FMOD
Fibromodulin.
      
 0.661
BATF3
Basic leucine zipper transcriptional factor ATF-like 3.
      
 0.659
LOC110484130
Transcription factor 4.
    
 
 0.622
TCF3
Transcription factor E2-alpha.
    
 
 0.622
TCF12
Transcription factor 12.
    
 
 0.622
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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