STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF2KMTProtein-lysine N-methyltransferase EEF2KMT. (301 aa)    
Predicted Functional Partners:
EEF2
Elongation factor 2.
    
 0.791
B9D1
B9 domain-containing protein 1.
    
 0.731
CC2D2A
Coiled-coil and C2 domain-containing protein 2A.
    
 0.719
B9D2
LOW QUALITY PROTEIN: B9 domain-containing protein 2.
    
 0.713
TMEM67
Meckelin.
   
 
 0.699
AHI1
Jouberin.
    
 0.665
MKS1
Meckel syndrome type 1 protein.
    
 0.662
KIN
DNA/RNA-binding protein KIN17.
    
 0.587
ENSLSDP00000013083
annotation not available
    
 0.587
ATPSCKMT
Protein FAM173B.
      
 0.582
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.