STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPAS2_0Neuronal PAS domain-containing protein 2. (388 aa)    
Predicted Functional Partners:
ARNTL2
Aryl hydrocarbon receptor nuclear translocator-like protein 2.
   
 0.808
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
   
 0.808
CIPC
CLOCK-interacting pacemaker.
    
 0.805
BHLHE41
Class E basic helix-loop-helix protein 41.
    
 0.759
SIRT1
NAD-dependent protein deacetylase sirtuin-1.
    
 0.757
PER3
Period circadian 3.
    
 0.705
PER2
Period circadian 2.
    
 0.705
CSNK1D
Casein kinase I isoform delta; Belongs to the protein kinase superfamily.
    
 0.703
CSNK1E
Casein kinase I isoform epsilon; Belongs to the protein kinase superfamily.
    
 0.703
LOC110480034
Cryptochrome-1.
   
 0.661
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.