Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
GRIN2AGlutamate receptor ionotropic, NMDA 2A. (1458 aa)    
Predicted Functional Partners:
GRIN2B
Glutamate receptor ionotropic, NMDA 2B.
   
0.999
GRIN1
Glutamate receptor ionotropic, NMDA 1.
   
0.998
GRIN3A
Glutamate receptor ionotropic, NMDA 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
 0.925
GRIN2D
Glutamate receptor ionotropic, NMDA 2D; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
0.872
GRIN2C
Glutamate receptor ionotropic, NMDA 2C; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
0.872
PTPN4
Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.
    
 
 0.833
DLGAP1
Disks large-associated protein 1.
   
 0.829
ENSLSDP00000020739
annotation not available
   
 0.808
GRIN3B
Glutamate receptor ionotropic, NMDA 3B; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
     
 0.788
GRM3
Metabotropic glutamate receptor 3.
   
 
 0.731
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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