STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIN2AGlutamate receptor ionotropic, NMDA 2A. (1458 aa)    
Predicted Functional Partners:
GRIN1
Glutamate receptor ionotropic, NMDA 1.
   
0.999
GRIN2B
Glutamate receptor ionotropic, NMDA 2B.
   
0.989
GRIN2D
Glutamate receptor ionotropic, NMDA 2D; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
0.967
GRIN2C
Glutamate receptor ionotropic, NMDA 2C; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
0.967
LOC110471410
Neuronal acetylcholine receptor subunit alpha-7.
     
 0.918
P2RX6
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family.
   
 
 0.901
P2RX4
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
     
  0.900
P2RX1
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
   
 
  0.900
PTPN4
Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.
    
 
 0.882
GRIN3A
Glutamate receptor ionotropic, NMDA 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
0.852
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.