STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001793annotation not available (394 aa)    
Predicted Functional Partners:
ENSLSDP00000019742
T-cell receptor-associated transmembrane adapter 1.
   
  
 0.613
SUOX
Sulfite oxidase.
      
 0.562
RNF34
E3 ubiquitin-protein ligase RNF34.
      
 0.551
HSPA9
Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family.
      
 0.530
AIG1
Androgen-induced gene 1 protein.
      
 0.521
RBM33
RNA-binding protein 33.
      
 0.465
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.