Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001793annotation not available (394 aa)    
Predicted Functional Partners:
ENSLSDP00000019742
T-cell receptor-associated transmembrane adapter 1.
   
  
 0.746
BOK
Bcl-2-related ovarian killer protein.
    
   0.710
AIG1
Androgen-induced gene 1 protein.
      
 0.678
ITPRID2
Sperm-specific antigen 2.
    
   0.659
RBM33
RNA-binding protein 33.
      
 0.585
NOCT
Nocturnin.
      
 0.565
FHDC1
FH2 domain-containing protein 1.
      
 0.548
TNK2
Activated CDC42 kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
      
 0.541
RNF34
E3 ubiquitin-protein ligase RNF34.
      
 0.539
TRMT13
tRNA:m(4)X modification enzyme TRM13.
      
 0.462
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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