Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110468277Poly [ADP-ribose] polymerase. (1802 aa)    
Predicted Functional Partners:
PARP9
Poly [ADP-ribose] polymerase.
   
 
 0.801
UBE2Z
Ubiquitin-conjugating enzyme E2 Z.
   
   0.720
IFIH1
Interferon-induced helicase C domain-containing protein 1.
   
 
 0.707
PARP16
Poly [ADP-ribose] polymerase.
      
 0.673
PARP3
Poly [ADP-ribose] polymerase.
    
 
 0.636
PARP1
Poly [ADP-ribose] polymerase.
   
 
 0.604
EPSTI1
Epithelial stromal interaction 1.
   
  
 0.570
HELZ2
Helicase with zinc finger domain 2.
   
 
 0.567
EIF2AK2
Interferon-induced, double-stranded RNA-activated protein kinase.
   
 
 0.472
PARG
Poly(ADP-ribose) glycohydrolase.
      
 0.462
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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