STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD99L2CD99 antigen-like protein 2. (265 aa)    
Predicted Functional Partners:
WDR54
WD repeat-containing protein 54.
      
 0.682
FGGY
FGGY carbohydrate kinase domain-containing protein.
      
 0.576
FUCA2
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
      
 0.569
ZCCHC2
Zinc finger CCHC domain-containing protein 2.
      
 0.568
EWSR1
RNA-binding protein EWS.
      
 0.568
CEP85
Centrosomal protein.
      
 0.568
NAB1
NGFI-A-binding protein 1.
      
 0.567
GRPEL2
GrpE 2, mitochondrial; Belongs to the GrpE family.
      
 0.566
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.548
PTGFRN
Prostaglandin F2 receptor negative regulator.
      
 0.546
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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