Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FCGBP_1IgGFc-binding protein. (525 aa)    
Predicted Functional Partners:
ENSLSDP00000008068
annotation not available
   
  0.583
B4GAT1
Beta-1,4-glucuronyltransferase 1.
      
 0.541
PKDREJ
Polycystic kidney disease and receptor for egg jelly-related protein.
      
 0.528
PARK7
Protein deglycase DJ-1.
      
 0.516
AGR2
Anterior gradient protein 2.
   
 
 0.470
LOC110478774
E3 SUMO-protein ligase RanBP2.
   
  0.467
CD9
Tetraspanin.
     
 0.448
GAPDH
Glyceraldehyde-3-phosphate dehydrogenase.
      
 0.445
ASF1A
Histone chaperone ASF1.
    
 0.434
FUNDC2
FUN14 domain-containing protein 2.
      
 0.431
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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