STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLAIN2SLAIN motif-containing protein 2. (595 aa)    
Predicted Functional Partners:
CKAP5
Cytoskeleton-associated protein 5.
    
 
 0.929
ENSLSDP00000008068
annotation not available
   
  0.797
RPS24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.600
ZC3H18
Zinc finger CCCH domain-containing protein 18.
    
 0.569
LOC110478774
E3 SUMO-protein ligase RanBP2.
   
 
  0.563
EXOC7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
      
 0.555
CENPX
Centromere protein X isoform X1.
      
 0.539
METTL26
UPF0585 protein C16orf13.
      
 0.504
ASF1A
Histone chaperone ASF1.
    
 0.454
SLC10A4
Sodium/bile acid cotransporter 4.
      
 0.443
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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